{"id":26,"date":"2017-05-09T16:24:11","date_gmt":"2017-05-09T16:24:11","guid":{"rendered":"http:\/\/vaccarilab.unimi.it\/?page_id=26"},"modified":"2023-12-27T14:15:27","modified_gmt":"2023-12-27T14:15:27","slug":"key-publications","status":"publish","type":"page","link":"https:\/\/www.vaccarilab.unimi.it\/index.php\/key-publications\/","title":{"rendered":"Publications and Teaching"},"content":{"rendered":"<h3><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/?term=vaccari+t\">All Publications from Medline<\/a><\/h3>\n<h3>Key Papers<\/h3>\n<p>Pandey A, Galeone A, Han SY, Story BA, Consonni G, Mueller WF, Steinmetz LM, <span style=\"text-decoration: underline;\">Vaccari T<\/span>, Jafar-Nejad H. (2023). Gut barrier defects, intestinal immune hyperactivation and enhanced lipid catabolism drive lethality in NGLY1-deficient Drosophila.<br \/>\n<a href=\"https:\/\/www.nature.com\/articles\/s41467-023-40910-w\" target=\"_blank\" rel=\"noopener\"><strong>Nature Communications<\/strong> doi: 10.1038\/s41467-023-40910-w<\/a>.<\/p>\n<p>Frappaolo A, Karimpour-Ghahnavieh A, Cesare G, Sechi S, Fraschini R, <span style=\"text-decoration: underline;\">Vaccari T<\/span>, Giansanti MG (2022). GOLPH3 protein controls organ growth by interacting with TOR signaling proteins in Drosophila.<br \/>\n<a href=\"https:\/\/www.nature.com\/articles\/s41419-022-05438-9\"><strong>Cell Death and Disease<\/strong> doi: 10.1038\/s41419-022-05438-9<\/a>.<\/p>\n<p>Fajner V, Giavazzi F, Sala S, Oldani A, Martini E, Napoletano F, Parazzoli D, Cesare G, Cerbino R, Maspero E,\u00a0<span style=\"text-decoration: underline;\">Vaccari T*<\/span>, Polo S (2021). Hecw controls oogenesis and neuronal homeostasis by promoting the liquid state of ribonucleoprotein particles. <a href=\"https:\/\/www.nature.com\/articles\/s41467-021-25809-8\"><strong>Nature<\/strong> <strong>Communications<\/strong> doi: 10.1038\/s41467-021-25809-8<\/a><\/p>\n<div class=\"supp\">\n<p>Formica M, Storaci AM, Bertolini I, Carminati F, Kn\u00e6velsrud H, Vaira V, <span style=\"text-decoration: underline;\">Vaccari T<\/span> (2021). V-ATPase controls tumor growth and autophagy in a Drosophila model of gliomagenesis.<br \/>\n<a href=\"http:\/\/10.1080\/15548627.2021.1918915\"><strong>Autophagy<\/strong> doi: 10.1080\/15548627.2021.1918915<\/a>.<\/p>\n<p class=\"p1\">Morelli E, Speranza E, Pellegrino E, Beznoussenko G, Carminati F, Garr\u00e9 M, Mironov AA, Onorati M and <span style=\"text-decoration: underline;\">Vaccari T<\/span> (2021). The SNARE protein SNAP29 is a new regulator of vesicle transport at the Golgi Apparatus and Endoplasmic Reticulum.\u00a0<a href=\"https:\/\/www.frontiersin.org\/articles\/10.3389\/fcell.2021.637565\/abstract\"><b>Frontiers in Cell and Developmental Biology <\/b>doi: 10.3389\/fcell.2021.637565<\/a><\/p>\n<p>Terrasi A, Bertolini I, Martelli C, Gaudioso G, Di Cristofori, Storaci AM, Formica M, Bosari S, Cairoli M, Ottobrini L, <span style=\"text-decoration: underline;\">Vaccari T*<\/span>, Vaira V (2019). A Specific V-ATPase expression sub-classifies IDHwt lower-grade gliomas and impacts glioma growth in vivoSpecific V-ATPase expression sub-classifies IDHwt lower-grade gliomas and impacts glioma growth in vivo. <a href=\"https:\/\/doi.org\/10.1016\/j.ebiom.2019.01.052\"><strong>EBioMedicine\u00a0<\/strong>https:\/\/doi.org\/10.1016\/j.ebiom.2019.01.052<\/a><\/p>\n<p>Mastrodonato V, Beznoussenko G, Mironov A, Ferrari L, Deflorian G &amp; <span style=\"text-decoration: underline;\">Vaccari T<\/span> (2019). A genetic model of CEDNIK syndrome in zebrafish highlights the role of the SNARE protein Snap29 in neuromotor and epidermal development. <a href=\"https:\/\/www.nature.com\/articles\/s41598-018-37780-4\"><strong>Scientific Reports\u00a0<\/strong>\u00a0<\/a><a href=\"https:\/\/www.nature.com\/articles\/s41598-018-37780-4\">https:\/\/www.nature.com\/articles\/s41598-018-37780-4<\/a><\/p>\n<p class=\"desc\">Rusmini P, Cortese K, Crippa V, Cristofani R, Cicardi ME, Ferrari V, Vezzoli G, Tedesco B, Meroni M, Messi E, Piccolella M, Galbiati M, Garr\u00e8 M, Morelli E, <span style=\"text-decoration: underline;\">Vaccari T<\/span>, Poletti A. (2018).\u00a0Trehalose induces autophagy via lysosomal-mediated TFEB activation in models of motoneuron degeneration.\u00a0<a href=\"https:\/\/www.tandfonline.com\/doi\/abs\/10.1080\/15548627.2018.1535292?journalCode=kaup20\"><strong><span class=\"jrnl\" title=\"Autophagy\">Autophagy<\/span><\/strong>\u00a018:1-21. doi: 10.1080\/15548627.2018.1535292<\/a><\/p>\n<\/div>\n<p>Morelli E, Mastrodonato V, Beznoussenko G, Mironov AA, Tognon E,\u00a0<u>Vaccari T<\/u>\u00a0(2016). An essential step of kinetochore formation controlled by the SNARE protein Snap29.<a href=\"http:\/\/emboj.embopress.org\/content\/early\/2016\/09\/19\/embj.201693991\">\u00a0<strong>The EMBO Journal\u00a0<\/strong>35(20): 2223-37<\/a>.\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/20-EMBOJ-2016.pdf\">PDF-EMBOJ-2016<\/a><\/p>\n<p>Tognon E, Kobia F, Busi I, Fumagalli A, De Masi F,\u00a0<u>Vaccari T<\/u>\u00a0(2016). Control\u00a0of lysosomal biogenesis and\u00a0Notch-dependent\u00a0tissue patterning by\u00a0components\u00a0of\u00a0the TFEB\/V-ATPase axis in\u00a0Drosophila melanogaster.\u00a0<a href=\"http:\/\/www.tandfonline.com\/doi\/abs\/10.1080\/15548627.2015.1134080\"><strong>Autophagy<\/strong>\u00a012(3): 499-514<\/a>.\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/19-Authophagy-2016.pdf\">PDF-Aut-2016<\/a><\/p>\n<p>Morelli E, Ginefra P, Mastrodonato V, Beznoussenko G, Rusten TE, Bilder D, Stenmark H, Mironov AA,\u00a0<u>Vaccari T<\/u>\u00a0(2014). Multiple functions of the SNARE protein Snap29 in autophagy, endocytic and exocytic trafficking during epithelial formation in Drosophila.\u00a0<a href=\"http:\/\/www.tandfonline.com\/doi\/abs\/10.4161\/15548627.2014.981913\"><strong>Autophagy\u00a0<\/strong>10(12): 2251-68<\/a>.\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/16-Autophagy-2014.pdf\">PDF-Aut-2014<\/a><\/p>\n<p>Kobia F, Duchi S, Deflorian G,\u00a0<u>Vaccari T<\/u>\u00a0(2014). Pharmacologic inhibition of vacuolar H+ ATPase reduces physiologic and oncogenic Notch signaling.\u00a0<a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1574789113001609\"><strong>Molecular Oncology<\/strong>\u00a0pii: S1574-7891(13): 00160-9<\/a>.\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/13-Mol-Oncol-2014.pdf\">PDF-Mol Oncol-2014<\/a><\/p>\n<p>Tognon E, Wollscheid N, Cortese K, Tacchetti C,\u00a0<u>Vaccari T\u00a0<\/u>(2014). ESCRT-0 is not required for ectopic Notch activation and tumor suppression in Drosophila.\u00a0<a href=\"http:\/\/journals.plos.org\/plosone\/article?id=10.1371\/journal.pone.0093987\"><strong>PLoS ONE<\/strong>\u00a09(4): e93987<\/a>.\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/15-PlosONE-2014.pdf\">PDF-PlosONE-2014<\/a><\/p>\n<p>Petzoldt AG, Gleixner EM, Fumagalli A,\u00a0<u>Vaccari T*\u00a0<\/u>and Simons M (2013). Activation of the proton pump, V-ATPase, triggers JNK-dependent cell invasion and overgrowth in a Drosophila epithelium.\u00a0<a href=\"http:\/\/dmm.biologists.org\/content\/6\/3\/689.short\"><strong>Disease Models &amp; Mechanisms\u00a0<\/strong>6(3): 689-700.<\/a>\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/15-PlosONE-2014-1.pdf\">PDF-PlosONE-2014<\/a>\u00a0*co-corresponding.<\/p>\n<p><u>Vaccari T*<\/u>, Duchi S, Cortese K, Tacchetti C, Bilder D (2010). The vacuolar ATPase is required for physiological as well as pathological activation of the Notch receptor.\u00a0<a href=\"http:\/\/dev.biologists.org\/content\/137\/11\/1825.short\"><strong>Development\u00a0<\/strong>137 (11): 1825-32<\/a>. <a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/10-Development-2010.pdf\">PDF-Develop-2010<\/a>\u00a0*co-corresponding<\/p>\n<h3>Key Reviews + Technicals<\/h3>\n<div class=\"supp\">\n<p>Smeele PH, <span style=\"text-decoration: underline;\">Vaccari T<\/span>. (2022) Snapshots from within the cell: Novel trafficking and non trafficking functions of Snap29 during tissue morphogenesis.<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1084952122000635\"><strong> Semin Cell Dev Biol. 2022 Mar 4:S1084-9521(22)00063-5. <\/strong>doi: 10.1016\/j.semcdb.2022.02.024<\/a>.<\/p>\n<p class=\"title\">Gualtieri M, <span style=\"text-decoration: underline;\">Vaccari T<\/span>. (2019) Genetic and Cell Biology Methods to Study ESCRTs in Drosophila melanogaster.<a href=\"https:\/\/drive.google.com\/file\/d\/1Hsi0Fz0qR-KIXdgG6YkFmGwvx6J3L5Z5\/view?usp=sharing\"><strong> <span class=\"jrnl\" title=\"Methods in molecular biology (Clifton, N.J.)\">Methods Mol Biol<\/span>. 1998:13-29.<\/strong> doi: 10.1007\/978-1-4939-9492-2_2.<\/a><\/p>\n<p>Mastrodonato V, Morelli E,\u00a0<span style=\"text-decoration: underline;\">Vaccari T<\/span>. (2018) How to use a multipurpose SNARE: The emerging role of Snap29 in cellular health. <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC6551745\/\"><strong><span class=\"jrnl\" title=\"Cell stress\">Cell Stress <\/span>2(4):72-81.<\/strong> doi: 10.15698\/cst2018.04.130<\/a>.<\/p>\n<p class=\"desc\">Alfred V, <span style=\"text-decoration: underline;\">Vaccari T<\/span>. (2018) \u00a0Mechanisms of Non-canonical Signaling in Health and Disease: Diversity to Take Therapy up a Notch?\u00a0<strong><a href=\"https:\/\/link.springer.com\/chapter\/10.1007%2F978-3-319-89512-3_9\"><span class=\"jrnl\" title=\"Advances in experimental medicine and biology\">Adv Exp Med Biol<\/span>. 1066:187-204. <\/a><\/strong><a href=\"https:\/\/link.springer.com\/chapter\/10.1007%2F978-3-319-89512-3_9\">doi: 10.1007\/978-3-319-89512-3_9<\/a>.<\/p>\n<\/div>\n<p>Horner D, Pasini ME, Beltrame M, Mastrodonato V, Morelli E,\u00a0 <span style=\"text-decoration: underline;\">Vaccari T.<\/span> (2017)<b>.<\/b> ESCRT genes in developmental signaling. <a href=\"http:\/\/www.sciencedirect.com\/science\/article\/pii\/S1084952116305031?via%3Dihub\"><b>Seminars in Cell &amp; Developmental Biology<\/b> <\/a>\u00a0pii: S1084-9521(16)30503-1<i>.\u00a0<\/i><\/p>\n<p class=\"title\">Tognon E,\u00a0<span style=\"text-decoration: underline;\">Vaccari T.<\/span> (2014). Immunohistochemical tools and techniques to visualize Notch in Drosophila melanogaster. <a href=\"https:\/\/drive.google.com\/file\/d\/13Cr43ZAnFLyJ830BdUYS6GrUWhVQq7hO\/view?usp=sharing\"><strong><span class=\"jrnl\" title=\"Methods in molecular biology (Clifton, N.J.)\">Methods Mol Biol<\/span>. 2014;1187:63-78.<\/strong> doi: 10.1007\/978-1-4939-1139-4_5.<\/a><\/p>\n<p>Rusten TE,\u00a0<u>Vaccari T,<\/u>\u00a0Stenmark H (2012). Shaping Development with ESCRTs.\u00a0<a href=\"http:\/\/www.nature.com\/ncb\/journal\/v14\/n1\/abs\/ncb2381.html\"><strong>Nature Cell Biology<\/strong>\u00a022;14(1): 38-45<\/a>.\u00a0<a href=\"http:\/\/vaccarilab.unimi.it\/wp-content\/uploads\/2017\/05\/11-Nat-Cell-Biol-2012.pdf\">PDF-Nat Cell Biol-2012<\/a><\/p>\n<h3>Undergraduate courses thought by Thomas<\/h3>\n<ol>\n<li><a href=\"https:\/\/www.unimi.it\/it\/ugov\/of\/af20200000f66-67\"><span style=\"text-decoration: underline;\">Biologia Generale e Ambientale con elementi di Istologia<\/span><\/a>. Corso di laurea triennale in Scienze Naturali. 2018- ongoing (Fall Semester).<\/li>\n<li><a href=\"https:\/\/www.unimi.it\/it\/ugov\/of\/af202000000f1b-4\"><span style=\"text-decoration: underline;\">Advanced Molecular and Cellular Biotechnology<\/span><\/a>. Master of Science in Molecular Biotechnology and Bioinformatics &#8211; 2018- ongoing (Spring Semester)<\/li>\n<li><a href=\"https:\/\/www.unimi.it\/en\/education\/degree-programme-courses\/2021\/cell-population-dynamics\"><span style=\"text-decoration: underline;\">Cell Population Dynamics<\/span><\/a>. Master of Science in Quantitative Biology &#8211; 2022- ongoing (Spring Semester)<br \/>\n<h3>Graduate mentoring by Thomas<\/h3>\n<p>Thomas is part of the faculty of the <a href=\"https:\/\/bioscienzebio.unimi.it\/dmcb.php\">Molecular and Cellular Biology PhD program<\/a> of the University of Milan<\/li>\n<\/ol>\n","protected":false},"excerpt":{"rendered":"<p>All Publications from Medline Key Papers Pandey A, Galeone A, Han SY, Story BA, Consonni G, Mueller WF, Steinmetz LM, Vaccari T, Jafar-Nejad H. (2023). Gut barrier defects, intestinal immune hyperactivation and enhanced lipid catabolism drive lethality in NGLY1-deficient Drosophila. &hellip; <a href=\"https:\/\/www.vaccarilab.unimi.it\/index.php\/key-publications\/\">Continued<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-feature.php","meta":{"kt_blocks_editor_width":"","footnotes":""},"class_list":["post-26","page","type-page","status-publish","hentry"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/pages\/26","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/comments?post=26"}],"version-history":[{"count":25,"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/pages\/26\/revisions"}],"predecessor-version":[{"id":769,"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/pages\/26\/revisions\/769"}],"wp:attachment":[{"href":"https:\/\/www.vaccarilab.unimi.it\/index.php\/wp-json\/wp\/v2\/media?parent=26"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}